EMCA publications
2023
Nucleocapsid protein accumulates in renal tubular epithelium of a post-COVID-19 patient.
Grootemaat AE, Wiersma N, van der Niet S, Schimmel IM, Florquin S, Reits EA, Miller SE, van der Wel NN.Microbiol Spectr. 2023 Nov 17.
IFT74 variants cause skeletal ciliopathy and motile cilia defects in mice and humans.
Bakey Z, Cabrera OA, Hoefele J, Antony D, Wu K, Stuck MW, Micha D, Eguether T, Smith AO, van der Wel NN, Wagner M, Strittmatter L, Beales PL, Jonassen JA, Thiffault I, Cadieux-Dion M, Boyes L, Sharif S, Tüysüz B, Dunstheimer D, Niessen HWM, Devine W, Lo CW, Mitchison HM, Schmidts M, Pazour GJ.PLoS Genet. 2023 Jun 14;19(6.
Sun J, Singh P, Shami A, Kluza E, Pan M, Djordjevic D, Michaelsen NB, Kennbäck C, van der Wel NN, Orho-Melander M, Nilsson J, Formentini I, Conde-Knape K, Lutgens E, Edsfeldt A, Gonçalves I.J Am Coll Cardiol. 2023 Jun 13;81(23):2213-2227.
Beaujean M, Uijen RF, Langereis JD, Boccara D, Dam D, Soria A, Veldhuis G, Adam L, Bonduelle O, van der Wel NN, Luirink J, Pedruzzi E, Wissink J, de Jonge MI, Combadière B.Vaccine. 2023 Mar 24;41(13):2270-2279.
IFT74 variants cause skeletal ciliopathy and motile cilia defects in mice and humans.
Bakey Z, Cabrera OA, Hoefele J, Antony D, Wu K, Stuck MW, Micha D, Eguether T, Smith AO, van der Wel NN, Wagner M, Strittmatter L, Beales PL, Jonassen JA, Thiffault I, Cadieux-Dion M, Boyes L, Sharif S, Tüysüz B, Dunstheimer D, Niessen HWM, Devine W, Lo CW, Mitchison HM, Schmidts M, Pazour GJ.medRxiv. 2023 Feb 26:2023.
Naessens DMP, de Vos J, Richard E, Wilhelmus MMM, Jongenelen CAM, Scholl ER, van der Wel NN, Heijst JA, Teunissen CE, Strijkers GJ, Coolen BF, VanBavel E, Bakker ENTP.Sci Rep. 2023 Mar 1;13(1):3481.
A terpene nucleoside from M. tuberculosis induces lysosomal lipid storage in foamy macrophages.
Bedard M, van der Niet S, Bernard EM, Babunovic G, Cheng TY, Aylan B, Grootemaat AE, Raman S, Botella L, Ishikawa E, O’Sullivan MP, O’Leary S, Mayfield JA, Buter J, Minnaard AJ, Fortune SM, Murphy LO, Ory DS, Keane J, Yamasaki S, Gutierrez MG, van der Wel N, Moody DB.J Clin Invest. 2023 Mar 15;133(6):e161944.
Nollet EE, Duursma I, Rozenbaum A, Eggelbusch M, Wüst RCI, Schoonvelde SAC, Michels M, Jansen M, van der Wel NN, Bedi KC, Margulies KB, Nirschl J, Kuster DWD, van der Velden J.Eur Heart J. 2023 Apr 1;44(13):1170-1185.
2022
Hyperactivation of mTORC1 in a double hit mutant zebrafish model of tuberous sclerosis complex causes increased seizure susceptibility and neurodevelopmental abnormalities. De Meulemeester AS, Heylen L, Siekierska A, Mills JD, Romagnolo A, Van Der Wel NN, Aronica E, de Witte PAM.Front Cell Dev Biol. 2022 Sep 27;10:952832.
The phospholipid flippase ATP8B1 is required for lysosomal fusion in macrophages. Gómez-Mellado VE, Ho-Mok KS, van der Mark VA, van der Wel NN, Grootemaat AE, Verhoeven AJ, Elferink RPJO, Paulusma CC.Cell Biochem Funct. 2022 Sep 28.
Transfer dynamics of multi-resistance plasmids in Escherichia coli isolated from meat. Darphorn TS, Koenders-van Sintanneland BB, Grootemaat AE, van der Wel NN, Brul S, Ter Kuile BH.PLoS One. 2022 Jul 7;17(7):e0270205.
Harnessing solar power: photoautotrophy supplements the diet of a low-light dwelling sponge. Hudspith M, de Goeij JM, Streekstra M, Kornder NA, Bougoure J, Guagliardo P, Campana S, van der Wel NN, Muyzer G, Rix L.ISME J. 2022 Sep;16(9):2076-2086.
Neutrophil Extracellular Traps Do Not Induce Injury and Inflammation in Well-Differentiated RSV-Infected Airway Epithelium. Linssen RSN, Sridhar A, Moreni G, van der Wel NN, van Woensel JBM, Wolthers KC, Bem RA.Cells. 2022 Feb 24;11(5):785.
Lipid and Nucleocapsid N-Protein Accumulation in COVID-19 Patient Lung and Infected Cells. Grootemaat AE, van der Niet S, Scholl ER, Roos E, Schurink B, Bugiani M, Miller SE, Larsen P, Pankras J, Reits EA, van der Wel NN.Microbiol Spectr. 2022 Feb 23;10(1).
Specific Silencing of Microglial Gene Expression in the Rat Brain by Nanoparticle-Based Small Interfering RNA Delivery. Guo S, Cázarez-Márquez F, Jiao H, Foppen E, Korpel NL, Grootemaat AE, Liv N, Gao Y, van der Wel N, Zhou B, Nie G, Yi CX.ACS Appl Mater Interfaces. 2022 Feb 2;14(4):5066-5079.
2021
Diverse ultrastructural landscape of atherosclerotic endothelium.
Kluza E, Beldman TJ, Shami A, Scholl ER, Malinova TS, Grootemaat AE, van der Wel NN, Gonçalves I, Huveneers S, Mulder WJM, Lutgens E.Atherosclerosis. 2021 Dec;339:35-45.
Zimmer TS, David B, Broekaart DWM, Schidlowski M, Ruffolo G, Korotkov A, van der Wel NN, van Rijen PC, Mühlebner A, van Hecke W, Baayen JC, Idema S, François L, van Eyll J, Dedeurwaerdere S, Kessels HW, Surges R, Rüber T, Gorter JA, Mills JD, van Vliet EA, Aronica E.Acta Neuropathol. 2021 Oct;142(4):729-759
Impaired myelin production due to an intrinsic failure of oligodendrocytes in mTORpathies.
Gruber VE, Lang J, Endmayr V, Diehm R, Pimpel B, Glatter S, Anink JJ, Bongaarts A, Luinenburg MJ, Reinten RJ, van der Wel N, Larsen P, Hainfellner JA, Rössler K, Aronica E, Scholl T, Mühlebner A, Feucht M.Neuropathol Appl Neurobiol. 2021 Oct;47(6):812-825.
Dekker NAM, van Leeuwen ALI, van Meurs M, Moser J, Pankras JE, van der Wel NN, Niessen HW, Vervloet MG, Vonk ABA, Hordijk PL, Boer C, van den Brom CE.Intensive Care Med Exp. 2021 Jun 25;9(1):30.
IL-1R1-Dependent Signals Improve Control of Cytosolic Virulent Mycobacteria In Vivo.
van der Niet S, van Zon M, de Punder K, Grootemaat A, Rutten S, Moorlag SJCFM, Houben D, van der Sar AM, Bitter W, Brosch R, Hernandez Pando R, Pena MT, Peters PJ, Reits EA, Mayer-Barber KD, van der Wel NN.mSphere. 2021 May 5;6(3):e00153-21.
GCase and LIMP2 Abnormalities in the Liver of Niemann Pick Type C Mice.
van der Lienden MJC, Aten J, Marques ARA, Waas ISE, Larsen PWB, Claessen N, van der Wel NN, Ottenhoff R, van Eijk M, Aerts JMFG.Int J Mol Sci. 2021 Mar 3;22(5):2532.
Control of septum thickness by the curvature of SepF polymers.
Wenzel M, Celik Gulsoy IN, Gao Y, Teng Z, Willemse J, Middelkamp M, van Rosmalen MGM, Larsen PWB, van der Wel NN, Wuite GJL, Roos WH, Hamoen LW.Proc Natl Acad Sci U S A. 2021 Jan 12;118(2):e2002635118.
van der Putten BCL, Matamoros S, Mende DR, Scholl ER, Consortium C, Schultsz C.Int J Syst Evol Microbiol. 2021 Feb;71(2):004609.
2020 EMCA AMC
Viral presence and immunopathology in patients with lethal COVID-19: a prospective autopsy cohort study. Schurink B, Roos E, Radonic T, Barbe E, Bouman CSC, de Boer HH, de Bree GJ, Bulle EB, Aronica EM, Florquin S, Fronczek J, Heunks LMA, de Jong MD, Guo L, du Long R, Lutter R, Molenaar PCG, Neefjes-Borst EA, Niessen HWM, van Noesel CJM, Roelofs JJTH, Snijder EJ, Soer EC, Verheij J, Vlaar APJ, Vos W, van der Wel NN, van der Wal AC, van der Valk P, Bugiani M. Lancet Microbe. 2020 Nov;1(7).
The MARCH6-SQLE Axis Controls Endothelial Cholesterol Homeostasis and Angiogenic Sprouting. Tan JME, van der Stoel MM, van den Berg M, van Loon NM, Moeton M, Scholl E, van der Wel NN, Kovačević I, Hordijk PL, Loregger A, Huveneers S, Zelcer N. Cell Rep. 2020 Aug 4;32(5).
Artificial Sporulation Induction (ASI) by kinA Overexpression Affects the Proteomes and Properties of Bacillus subtilis Spores.Tu Z, R Abhyankar W, N Swarge B, van der Wel N, Kramer G, Brul S, J de Koning L. Int J Mol Sci. 2020 Jun 17;21(12):4315.
Mitochondrial translation and dynamics synergistically extend lifespan in C. elegans through HLH-30. Liu YJ, McIntyre RL, Janssens GE, Williams EG, Lan J, van Weeghel M, Schomakers B, van der Veen H, van der Wel NN, Yao P, Mair WB, Aebersold R, MacInnes AW, Houtkooper RH. J Cell Biol. 2020 Jun 1;219(6).
ATF2 and ATF7 Are Critical Mediators of Intestinal Epithelial Repair. Meijer BJ, Giugliano FP, Baan B, van der Meer JHM, Meisner S, van Roest M, Koelink PJ, de Boer RJ, Jones N, Breitwieser W, van der Wel NN, Wildenberg ME, van den Brink GR, Heijmans J, Muncan V. Cell Mol Gastroenterol Hepatol. 2020;10(1):23-42.
Chronic Exposure of Gingival Fibroblasts to TLR2 or TLR4 Agonist Inhibits Osteoclastogenesis but Does Not Affect Osteogenesis. Karlis GD, Schöningh E, Jansen IDC, Schoenmaker T, Hogervorst JMA, van Veen HA, Moonen CGJ, Łagosz-Ćwik KB, Forouzanfar T, de Vries TJ.Front Immunol. 2020 Jul 23;11:1693.
Pathologie
Platelet inhibition by ticagrelor is protective against diabetic nephropathy in mice Uil M, Butter LM, Claessen N, Larsen PW, Florquin S, Roelofs JJTH.FASEB J. 2020 Oct;34(10):13750-13761.
NKI
MKL1 deficiency results in a severe neutrophil motility defect due to impaired actin polymerization. Sprenkeler EGG, Henriet SSV, Tool ATJ, Kreft IC, van der Bijl I, Aarts CEM, van Houdt M, Verkuijlen PJJH, van Aerde K, Jaspers G, van Heijst A, Koole W, Gardeitchik T, Geissler J, de Boer M, Tol S, Bruggeman CW, van Alphen FPJ, Verhagen HJMP, van den Akker E, Janssen H, van Bruggen R, van den Berg TK, Liem KD, Kuijpers TW.Sprenkeler EGG, et al. Blood. 2020 Jun 11;135(24):2171-2181.
Defective neutrophil development and specific granule deficiency caused by a homozygous splice-site mutation in SMARCD2. Schim van der Loeff I, Sprenkeler EGG, Tool ATJ, Abinun M, Grainger A, Engelhardt KR, van Houdt M, Janssen H, Kuijpers TW, Hambleton S.Schim van der Loeff I, et al. J Allergy Clin Immunol. 2020 Dec 3:S0091-6749(20)31698-5.
2019
Amsterdam UMC location AMC
Mycobacterium tuberculosis releases an antacid that remodels phagosomes. Buter J, Cheng TY, Ghanem M, Grootemaat AE, Raman S, Feng X, Plantijn AR, Ennis T, Wang J, Cotton RN, Layre E, Ramnarine AK, Mayfield JA, Young DC, Jezek Martinot A, Siddiqi N, Wakabayashi S, Botella H, Calderon R, Murray M, Ehrt S, Snider BB, Reed MB, Oldfield E, Tan S, Rubin EJ, Behr MA, van der Wel NN, Minnaard AJ, Moody DB. Nat Chem Biol. 2019 Sep;15(9):889-899.
Nanoparticle-Aided Characterization of Arterial Endothelial Architecture during Atherosclerosis Progression and Metabolic Therapy. Beldman TJ, Malinova TS, Desclos E, Grootemaat AE, Misiak ALS, van der Velden S, van Roomen CPAA, Beckers L, van Veen HA, Krawczyk PM, Hoebe RA, Sluimer JC, Neele AE, de Winther MPJ, van der Wel NN, Lutgens E, Mulder WJM, Huveneers S, Kluza E. ACS Nano. 2019 Jul 10.
Liver disease predominates in a mouse model for mild human Zellweger spectrum disorder. Berendse K, Boek M, Gijbels M, Van der Wel NN, Klouwer FC, van den Bergh-Weerman MA, Shinde AB, Ofman R, Poll-The BT, Houten SM, Baes M, Wanders RJA, Waterham HR. Biochim Biophys Acta Mol Basis Dis. 2019 Oct 1;1865(10):2774-2787.
Extravasation of Microspheres in a Rat Model of Silent Brain Infarcts. van der Wijk AE, Lachkar N, de Vos J, Grootemaat AE, van der Wel NN, Hordijk PL, Bakker ENTP, vanBavel E.Stroke. 2019 Jun;50(6):1590-1594.
Inhibition of autotransporter biogenesis by small molecules. Steenhuis M, Abdallah AM, de Munnik SM, Kuhne S, Sterk GJ, van den Berg van Saparoea B, Westerhausen S, Wagner S, van der Wel NN, Wijtmans M, van Ulsen P, Jong WSP, Luirink J. Mol Microbiol. 2019 Jul;112(1):81-98.
Eosinophils capture viruses, a capacity that is defective in asthma. Sabogal Piñeros YS, Bal SM, Dijkhuis A, Majoor CJ, Dierdorp BS, Dekker T, Hoefsmit EP, Bonta PI, Picavet D, van der Wel NN, Koenderman L, Sterk PJ, Ravanetti L, Lutter R. Allergy. 2019 Apr 1.
Expression patterns of endothelial permeability pathways in the development of the blood-retinal barrier in mice. van der Wijk AE, Wisniewska-Kruk J, Vogels IMC, van Veen HA, Ip WF, van der Wel NN, van Noorden CJF, Schlingemann RO, Klaassen I. FASEB J. 2019 Apr;33(4):5320-5333.
Maturing Human CD127+ CCR7+ PDL1+ Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens. Fergusson JR, Morgan MD, Bruchard M, Huitema L, Heesters BA, van Unen V, van Hamburg JP, van der Wel NN, Picavet D, Koning F, Tas SW, Anderson MS, Marioni JC, Holländer GA, Spits H.Front Immunol. 2019 Jan 14;9:2902.
Ultra-soft X-ray system for imaging the early cellular responses to X-ray induced DNA damage. Kochan JA, van den Belt M, von der Lippe J, Desclos ECB, Steurer B, Hoebe RA, Scutigliani EM, Verhoeven J, Stap J, Bosch R, Rijpkema M, van Oven C, van Veen HA, Stellingwerf I, Vriend LEM, Marteijn JA, Aten JA, Krawczyk PM. Nucleic Acids Res. 2019 Sep 26;47(17)
Clonal expansion of a virulent Streptococcus suis serotype 9 lineage distinguishable from carriage subpopulations. Willemse N, van der Ark KCH, Stockhofe-Zurwieden N, Smith H, Picavet DI, van Solt-Smits C, Wisselink HJ, Schultsz C, de Greeff A. Sci Rep. 2019 Oct 28;9(1):15429.
Pathology-EM
β-Cyclodextrin counteracts obesity in Western diet-fed mice but elicits a nephrotoxic effect. Scantlebery AML, Ochodnicky P, Kors L, Rampanelli E, Butter LM, El Boumashouli C, Claessen N, Teske GJ, van den Bergh Weerman MA, Leemans JC, Roelofs JJTH, Florquin S. Sci Rep. 2019 Nov 27;9(1):17633.
Author Correction: Combining streptozotocin and unilateral nephrectomy is an effective method for inducing experimental diabetic nephropathy in the ‘resistant’ C57Bl/6J mouse strain.Uil M, Scantlebery AML, Butter LM, Larsen PWB, de Boer OJ, Leemans JC, Florquin S, Roelofs JJTH. Sci Rep. 2019 Feb 27;9(1):3425.
NKI
Activated neutrophils exert myeloid-derived suppressor cell activity damaging T cells beyond repair. Aarts CEM, Hiemstra IH, Béguin EP, Hoogendijk AJ, Bouchmal S, van Houdt M, Tool ATJ, Mul E, Jansen MH, Janssen H, van Alphen FPJ, de Boer JP, Zuur CL, Meijer AB, van den Berg TK, Kuijpers TW. Blood Adv. 2019 Nov 26;3(22):3562-3574..
Molecular mechanisms of bleeding disorderassociated GFI1BQ287* mutation and its affected pathways in megakaryocytes and platelets. van Oorschot R, Hansen M, Koornneef JM, Marneth AE, Bergevoet SM, van Bergen MGJM, van Alphen FPJ, van der Zwaan C, Martens JHA, Vermeulen M, Jansen PWTC, Baltissen MPA, Gorkom BAPL, Janssen H, Jansen JH, von Lindern M, Meijer AB, van den Akker E, van der Reijden BA. Haematologica. 2019 Jul;104(7):1460-1472.
USP32 regulates late endosomal transport and recycling through deubiquitylation of Rab7 Sapmaz A, Berlin I, Bos E, Wijdeven RH, Janssen H, Konietzny R, Akkermans JJ, Erson-Bensan AE, Koning RI, Kessler BM, Neefjes J, Ovaa H. . Nat Commun. 2019 Mar 29;10(1):1454.
Modulation of TAP-dependent antigen compartmentalization during human monocyte-to-DC differentiation. Döring M, Blees H, Koller N, Tischer-Zimmermann S, Müsken M, Henrich F, Becker J, Grabski E, Wang J, Janssen H, Zuschratter W, Neefjes J, Klawonn F, Eiz-Vesper B, Tampé R, Kalinke U. Blood Adv. 2019 Mar 26;3(6):839-850.
2018
AMC
Interfering With DNA Decondensation as a Strategy Against Mycobacteria. Scutigliani EM, Scholl ER, Grootemaat AE, Khanal S, Kochan JA, Krawczyk PM, Reits EA, Garzan A, Ngo HX, Green KD, Garneau-Tsodikova S, Ruijter JM, van Veen HA, van der Wel NN. Front Microbiol. 2018 Sep 5;9:2034.
Role of Peptidylarginine Deiminase 4 in Neutrophil Extracellular Trap Formation and Host Defense during Klebsiella pneumoniae-Induced Pneumonia-Derived Sepsis. Claushuis TAM, van der Donk LEH, Luitse AL, van Veen HA, van der Wel NN, van Vught LA, Roelofs JJTH, de Boer OJ, Lankelma JM, Boon L, de Vos AF, van ‘t Veer C, van der Poll T. J Immunol. 2018 Aug 15;201(4):1241-1252.
Nbeal2 Deficiency Increases Organ Damage but Does Not Affect Host Defense During Gram-Negative Pneumonia-Derived Sepsis. Claushuis TAM, de Stoppelaar SF, de Vos AF, Grootemaat AE, van der Wel NN, Roelofs JJTH, Ware J, Van’t Veer C, van der Poll T. Arterioscler Thromb Vasc Biol. 2018 Aug;38(8):1772-1784.
Mycobacteria employ two different mechanisms to cross the blood-brain barrier. van Leeuwen LM, Boot M, Kuijl C, Picavet DI, van Stempvoort G, van der Pol SMA, de Vries HE, van der Wel NN, van der Kuip M, van Furth AM, van der Sar AM, Bitter W. Cell Microbiol. 2018 Sep;20(9):e12858.
Thrombospondin-4 mediates cardiovascular remodelling in angiotensin II-induced hypertension. Palao T, Medzikovic L, Rippe C, Wanga S, Al-Mardini C, van Weert A, de Vos J, van der Wel NN, van Veen HA, van Bavel ET, Swärd K, de Waard V, Bakker EN. Cardiovasc Pathol. 2018 Jul – Aug;35:12-19. doi: 10.1016/j.carpath.2018.03.003. Epub 2018 Apr 7. PMID: 29729633 Free Article
Systemic inhibition of the membrane attack complex impedes neuroinflammation in chronic relapsing experimental autoimmune encephalomyelitis. Michailidou I, Jongejan A, Vreijling JP, Georgakopoulou T, de Wissel MB, Wolterman RA, Ruizendaal P, Klar-Mohamad N, Grootemaat AE, Picavet DI, Kumar V, van Kooten C, Woodruff TM, Morgan BP, van der Wel NN, Ramaglia V, Fluiter K, Baas F. Acta Neuropathol Commun. 2018 May 3;6(1):36. d
Extracellular vesicles from human saliva promote hemostasis by delivering coagulant tissue factor to activated platelets. Yu Y, Gool E, Berckmans RJ, Coumans FAW, Barendrecht AD, Maas C, van der Wel NN, Altevogt P, Sturk A, Nieuwland R. J Thromb Haemost. 2018 Jun;16(6):1153-1163.
Spatial and temporal recruitment of the neurovascular unit during development of the mouse blood-retinal barrier. van der Wijk AE, Vogels IMC, van Veen HA, van Noorden CJF, Schlingemann RO, Klaassen I. Tissue Cell. 2018 Jun;52:42-50.
Four possible cases of osteomalacia: The value of a multidisciplinary diagnostic approach. van der Merwe AE, Veselka B, van Veen HA, van Rijn RR, Colman KL, de Boer HH. Int J Paleopathol. 2018 PMID: 29655998
The MEF2 transcriptional target DMPK induces loss of sarcomere structure and cardiomyopathy. Damanafshan A, Elzenaar I, Samson-Couterie B, van der Made I, Bourajjaj M, van den Hoogenhof MM, van Veen HA, Picavet DI, Beqqali A, Ehler E, De Windt LJ, Pinto YM, van Oort RJ. Cardiovasc Res. 2018 Sep 1;114(11):1474-1486.
Synthetic antimicrobial peptides delocalize membrane bound proteins thereby inducing a cell envelope stress response. Omardien S, Drijfhout JW, van Veen H, Schachtschabel S, Riool M, Hamoen LW, Brul S, Zaat SAJ. Biochim Biophys Acta Biomembr. 2018 Nov;1860(11):2416-2427.
The footprint of cometary dust analogs: Laboratory experiments of low-velocity impacts and comparison with Rosetta data L. E. Ellerbroek1, B. Gundlach, A. Landeck, C. Dominik, J. Blum, S. Merouane, M. Hilchenbach, M. S. Bentley, T. Mannel, H. John, H. A. van Veen. Astrophysics > Earth and Planetary Astrophysics doi: 10.1093
Pathology-EM
Combining streptozotocin and unilateral nephrectomy is an effective method for inducing experimental diabetic nephropathy in the ‘resistant’ C57Bl/6J mouse strain. Uil M, Scantlebery AML, Butter LM, Larsen PWB, de Boer OJ, Leemans JC, Florquin S, Roelofs JJTH. Sci Rep. 2018 Apr 3;8(1):5542.
Excessive dietary lipid intake provokes an acquired form of lysosomal lipid storage disease in the kidney. Rampanelli E, Ochodnicky P, Vissers JP, Butter LM, Claessen N, Calcagni A, Kors L, Gethings LA, Bakker SJ, de Borst MH, Navis GJ, Liebisch G, Speijer D, van den Bergh Weerman MA, Jung B, Aten J, Steenbergen E, Schmitz G, Ballabio A, Florquin S, Aerts JM, Leemans JC. J Pathol. 2018 Dec;246(4):470-484.
Deletion of NLRX1 increases fatty acid metabolism and prevents diet-induced hepatic steatosis and metabolic syndrome. Kors L, Rampanelli E, Stokman G, Butter LM, Held NM, Claessen N, Larsen PWB, Verheij J, Zuurbier CJ, Liebisch G, Schmitz G, Girardin SE, Florquin S, Houtkooper RH, Leemans JC. Biochim Biophys Acta Mol Basis Dis. 2018 May;1864(5 Pt A):1883-1895.
NKI
Mechanisms of integrin αVβ5 clustering in flat clathrin lattices. Zuidema A, Wang W, Kreft M, Te Molder L, Hoekman L, Bleijerveld OB, Nahidiazar L, Janssen H, Sonnenberg A. Journal of Cell Science. 2018; 131(21).
Weibel-Palade Body Localized Syntaxin-3 Modulates Von Willebrand Factor Secretion From Endothelial Cells. Schillemans M, Karampini E, van den Eshof BL, Gangaev A, Hofman M, van Breevoort D, Meems H, Janssen H, Mulder AA, Jost CR, Escher JC, Adam R, Carter T, Koster AJ, van den Biggelaar M, Voorberg J, Bierings R. Arteriosclerosis, thrombosis, and vascular biology. 2018; 38(7):1549-1561.
Neutrophils Kill Antibody-Opsonized Cancer Cells by Trogoptosis. Matlung HL, Babes L, Zhao XW, van Houdt M, Treffers LW, van Rees DJ, Franke K, Schornagel K, Verkuijlen P, Janssen H, Halonen P, Lieftink C, Beijersbergen RL, Leusen JHW, Boelens JJ, Kuhnle I, van der Werff Ten Bosch J, Seeger K, Rutella S, Pagliara D, Matozaki T, Suzuki E, Menke-van der Houven van Oordt CW, van Bruggen R, Roos D, van Lier RAW, Kuijpers TW, Kubes P, van den Berg TK. Cell reports. 2018; 23(13):3946-3959.e6.
Correction: Quantifying exosome secretion from single cells reveals a modulatory role for GPCR signaling. Verweij FJ, Bebelman MP, Jimenez CR, Garcia-Vallejo JJ, Janssen H, Neefjes J, Knol JC, de Goeij-de Haas R, Piersma SR, Baglio SR, Verhage M, Middeldorp JM, Zomer A, van Rheenen J, Coppolino MG, Hurbain I, Raposo G, Smit MJ, Toonen RFG, van Niel G, Pegtel DM. The Journal of cell biology. 2018; 217(3):1157.
EMCA publications 2017
AMC
Deletion of Adseverin in Osteoclasts Affects Cell Structure But Not Bone Metabolism. Cao Y, Wang Y, Sprangers S, Picavet DI, Glogauer M, McCulloch CA, Everts V. Calcif Tissue Int. 2017 Aug;101(2):207-216.
Thrombospondin-4 knockout in hypertension protects small-artery endothelial function but induces aortic aneurysms. Palao T, Rippe C, van Veen H, VanBavel E, Swärd K, Bakker EN. Am J Physiol Heart Circ Physiol. 2016 Jun 1;310(11):H1486-93.
Lipoprotein Lipase Maintains Microglial Innate Immunity in Obesity. Gao Y, Vidal-Itriago A, Kalsbeek MJ, Layritz C, García-Cáceres C, Tom RZ, Eichmann TO, Vaz FM, Houtkooper RH, van der Wel N, Verhoeven AJ, Yan J, Kalsbeek A, Eckel RH, Hofmann SM, Yi CX. Cell Rep. 2017 Sep 26;20(13):3034-3042.
Characterization and Temperature Dependence of Arctic Micromonas polaris Viruses. Maat DS, Biggs T, Evans C, van Bleijswijk JDL, van der Wel NN, Dutilh BE, Brussaard CPD. Viruses. 2017 Jun 2;9(6).
Subcellular localization of M. tuberculosis in vivo and effect of the adaptive immunity. van Zon M, de Punder K, van der Sar A, Brosch R, Pando RH, Grootemaat A, Tigchelaar-Gutter W, van der Wel N. Ultrastruct Pathol. 2017
Hyaluronan Nanoparticles Selectively Target Plaque-Associated Macrophages and Improve Plaque Stability in Atherosclerosis. Beldman TJ, Senders ML, Alaarg A, Pérez-Medina C, Tang J, Zhao Y, Fay F, Deichmöller J, Born B, Desclos E, van der Wel NN, Hoebe RA, Kohen F, Kartvelishvily E, Neeman M, Reiner T, Calcagno C, Fayad ZA, de Winther MPJ, Lutgens E, Mulder WJM, Kluza E. ACS Nano. 2017 Jun 27;11(6):5785-5799.
Receptor usage dictates HIV-1 restriction by human TRIM5α in dendritic cell subsets. Ribeiro CM, Sarrami-Forooshani R, Setiawan LC, Zijlstra-Willems EM, van Hamme JL, Tigchelaar W, van der Wel NN, Kootstra NA, Gringhuis SI, Geijtenbeek TB. Nature. 2016 Dec 15;540(7633):448-452.
The Influence of Sporulation Conditions on the Spore Coat Protein Composition of Bacillus subtilis Spores. Abhyankar WR, Kamphorst K, Swarge BN, van Veen H, van der Wel NN, Brul S, de Koster CG, de Koning LJ. Front Microbiol. 2016 Oct 13;7:1636.
Paravascular channels, cisterns, and the subarachnoid space in the rat brain: A single compartment with preferential pathways. Bedussi B, van der Wel NN, de Vos J, van Veen H, Siebes M, VanBavel E, Bakker EN. J Cereb Blood Flow Metab. 2017 Apr;37(4):1374-1385.
Pathologie
NLRX1 dampens oxidative stress and apoptosis in tissue injury via control of mitochondrial activity. Stokman G, Kors L, Bakker PJ, Rampanelli E, Claessen N, Teske GJD, Butter L, van Andel H, van den Bergh Weerman MA, Larsen PWB, Dessing MC, Zuurbier CJ, Girardin SE, Florquin S, Leemans JC. J Exp Med. 2017 Aug 7;214(8):2405-2420.
Metabolic injury-induced NLRP3 inflammasome activation dampens phospholipid degradation. Rampanelli E, Orsó E, Ochodnicky P, Liebisch G, Bakker PJ, Claessen N, Butter LM, van den Bergh Weerman MA, Florquin S, Schmitz G, Leemans JC.Sci Rep. 2017 Jun 6;7(1):2861.
NKI
Knockout of the Arp2/3 complex in epidermis causes a psoriasis-like disease hallmarked by hyperactivation of transcription factor Nrf2. Rob van der Kammen, Ji-Ying Song, Iris de Rink, Hans Janssen, Stefania Madonna, Claudia Scarponi, Cristina Albanesi, Wim Brugman, Metello Innocenti. Development. 2017 Nov 7.
Flat clathrin lattices are dynamic actin-controlled hubs for clathrin-mediated endocytosis and signalling of specific receptors. Leyton-Puig D, Isogai T, Argenzio E, van den Broek B, Klarenbeek J, Janssen H, Jalink K, Innocenti M. Nat Commun. 2017 Jul 13;8:16068.
Improving the solubility of nilotinib through novel spray-dried solid dispersions. Maikel Herbrink, Jan H.M. Schellens, Jos H. Beijnen, Bastiaan Nuijen. Int J Pharm. 2017 Jul 8;529(1-2):294-302.
Hermansky-Pudlak syndrome type 2: Aberrant pre-mRNA splicing and mislocalization of granule proteins in neutrophils. de Boer M, van Leeuwen K, Geissler J, van Alphen F, de Vries E, van der Kuip M, Terheggen SWJ, Janssen H, van den Berg TK, Meijer AB, Roos D, Kuijpers TWHum Mutat. 2017 Jun 6.
PLA2G16 represents a switch between entry and clearance of Picornaviridae. Staring J, von Castelmur E, Blomen VA, van den Hengel LG, Brockmann M, Baggen J, Thibaut HJ, Nieuwenhuis J, Janssen H, van Kuppeveld FJ, Perrakis A, Carette JE, Brummelkamp TR. Nature. 2017 Jan 19;541(7637):412-416.
EMCA publications 2015-2016
AMC
Receptor usage dictates HIV-1 restriction by human TRIM5α in dendritic cell subsets. Ribeiro CM, Sarrami-Forooshani R, Setiawan LC, Zijlstra-Willems EM, van Hamme JL, Tigchelaar W, van der Wel NN, Kootstra NA, Gringhuis SI, Geijtenbeek TB. Nature. 2016 Dec 15;540(7633):448-452.
The influence of sporulation conditions on the spore coat protein composition of Bacillus subtilis spores. Wishwas R. Abhyankar, Kiki Kamphorst, Bhagyashree N. Swarge, Henk van Veen, Nicole N. van der Wel, Stanley Brul, Chris G. de Koster, Leo J. de Koning. Frontiers in Microbiology 2016
The Thyroid Hormone Inactivating Enzyme Type 3 Deiodinase is Present in Bactericidal Granules and the Cytoplasm of Human Neutrophils. van der Spek AH, Bloise FF, Tigchelaar W, Dentice M, Salvatore D, van der Wel NN, Fliers E, Boelen A. Endocrinology. 2016 Aug;157(8):3293-305
Paravascular channels, cisterns, and the subarachnoid space in the rat brain: A single compartment with preferential pathways. Bedussi B, van der Wel NN, de Vos J, van Veen H, Siebes M, VanBavel E, Bakker EN. J Cereb Blood Flow Metab. 2016 Jun 15.
The ESX-5 System of Pathogenic Mycobacteria Is Involved In Capsule Integrity and Virulence through Its Substrate PPE10. Ates LS, van der Woude AD, Bestebroer J, van Stempvoort G, Musters RJ, Garcia-Vallejo JJ, Picavet DI, Weerd Rv, Maletta M, Kuijl CP, van der Wel NN, Bitter W. PLoS Pathog. 2016 Jun 9;12(6).
Bacillus subtilis Spore Inner Membrane Proteome. Zheng L, Abhyankar W, Ouwerling N, Dekker HL, van Veen H, van der Wel NN, Roseboom W, de Koning LJ, Brul S, de Koster CG. J Proteome Res. 2016 Feb 5;15(2):585-94.
Betulinic acid induces a novel cell death pathway that depends on cardiolipin modification. Potze L, Di Franco S, Grandela C, Pras-Raves ML, Picavet DI, van Veen HA, van Lenthe H, Mullauer FB, van der Wel NN, Luyf A, van Kampen AH, Kemp S, Everts V, Kessler JH, Vaz FM, Medema JP. Oncogene. 2016 Jan 28;35(4):427-37.
Increased epidermal thickness and abnormal epidermal differentiation in keloid scars. Limandjaja GC, van den Broek LJ, Waaijman T, van Veen HA, Everts V, Monstrey S, Scheper RJ, Niessen FB, Gibbs S. Br J Dermatol. 2016 Jul 5.
Ultrastructural aspects of foreign body giant cells generated on different substrates. Ten Harkel B, Koopsen J, van Putten SM, van Veen H, Picavet DI, de Vries TJ, Bank RA, Everts V. J Struct Biol. 2016 Jul;195(1):31-40.
New insights into the effects of Chronic kidney failure and dialysate exposure on the peritoneum. Vlahu CA, Aten J, de Graaff M, van Veen H, Everts V, de Waart DR, Struijk DG, Krediet RT. Perit Dial Int. 2016
Thrombospondin-4 knockout in hypertension protects small-artery endothelial function but induces aortic aneurysms. Palao T, Rippe C, van Veen H, VanBavel E, Swärd K, Bakker EN. Am J Physiol Heart Circ Physiol. 2016 Jun 1;310(11).
Plasmalemma Vesicle-Associated Protein Has a Key Role in Blood-Retinal Barrier Loss. Wisniewska-Kruk J, van der Wijk AE, van Veen HA, Gorgels TG, Vogels IM, Versteeg D, Van Noorden CJ, Schlingemann RO, Klaassen I. Am J Pathol. 2016 Apr;186(4):1044-54
Ultrastructural effects and antibiofilm activity of LFchimera against Burkholderia pseudomallei. Puknun A, Kanthawong S, Anutrakunchai C, Nazmi K, Tigchelaar W, Hoeben KA, Veerman EC, Bolscher JG, Taweechaisupapong S. World. J Microbiol Biotechnol. 2016 Feb;32(2):33. doi: 10.1007/s11274-015-1988-x. Epub 2016 Jan 11.
The foreign body giant cell cannot resorb bone, but dissolves hydroxyapatite like osteoclasts. ten Harkel B, Schoenmaker T, Picavet DI, Davison NL, de Vries TJ, Everts V. PLoS One. 2015 Oct 1;10(10):e0139564. doi: 10.1371/journal.pone.0139564. eCollection 2015.
Pathologie
Mucosal integrity and sensitivity to acid in the proximal esophagus in patients with gastroesophageal reflux disease. van Hoeij FB, Weijenborg PW, van den Bergh Weerman MA, van den Wijngaard RM, Verheij J, Smout AJ, Bredenoord AJ. Am J Physiol Gastrointest Liver Physiol. 2016 Jul 1;311(1)
Noncirrhotic Portal Hypertension in Perinatally HIV-infected Adolescents Treated With Didanosine-containing Antiretroviral Regimens in Childhood. Scherpbier HJ, Terpstra V, Pajkrt D, Puthakanit T, Ananworanich J, Foster C, van den Bergh Weerman M, Deurloo EE, van der Valk M, Kuijpers TW, Koot BG.Pediatr Infect Dis J. 2016 Aug;35(8):e248-52.
Unique Renal Manifestation of Type I Cryoglobulinemia, With Massive Crystalloid Deposits in Glomerular Histiocytes, Podocytes, and Endothelial Cells. Hoelbeek J, Duivenvoorden R, de Boer OJ, Claessen N, Van den Bergh Weerman MA, Roelofs JJ, Kers J, Ten Berge IJ, Florquin S. Am J Clin Pathol. 2016 Feb;145(2):282-5.
Histological Response to Fluticasone Propionate in Patients With Eosinophilic Esophagitis Is Associated With Improved Functional Esophageal Mucosal Integrity. van Rhijn BD, Verheij J, van den Bergh Weerman MA, Verseijden C, van den Wijngaard RM, de Jonge WJ, Smout AJ, Bredenoord AJ. Am J Gastroenterol. 2015 Sep;110(9):1289-97.
ACTA
Sprangers S, Behrendt N, Engelholm L, Cao Y, Everts V. Phagocytosis of
Collagen Fibrils by Fibroblasts In Vivo Is Independent of the uPARAP/Endo180
Receptor. J Cell Biochem. 2016
Limandjaja GC, van den Broek LJ, Waaijman T, van Veen HA, Everts V, Monstrey
S, Scheper RJ, Niessen FB, Gibbs S. Increased epidermal thickness and abnormal
epidermal differentiation in keloid scars. Br J Dermatol. 2017
Jan;176(1):116-126.
Ten Harkel B, Koopsen J, van Putten SM, van Veen H, Picavet DI, de Vries TJ,
Bank RA, Everts V. Ultrastructural aspects of foreign body giant cells generated
on different substrates. J Struct Biol. 2016.
ten Harkel B, Schoenmaker T, Picavet DI, Davison NL, de Vries TJ, Everts V.
The Foreign Body Giant Cell Cannot Resorb Bone, But Dissolves Hydroxyapatite Like
Osteoclasts. PLoS One. 2015 Oct 1;10
Potze L, Di Franco S, Grandela C, Pras-Raves ML, Picavet DI, van Veen HA, van
Lenthe H, Mullauer FB, van der Wel NN, Luyf A, van Kampen AH, Kemp S, Everts V,
Kessler JH, Vaz FM, Medema JP. Betulinic acid induces a novel cell death pathway
that depends on cardiolipin modification. Oncogene. 2016 Jan 28;35(4):427-37.
NKI
Staring J, von Castelmur E, Blomen VA, van den Hengel LG, Brockmann M, Baggen J, Thibaut HJ, Nieuwenhuis J, Janssen H, van Kuppeveld FJ, Perrakis A, Carette JE, Brummelkamp TR. PLA2G16 represents a switch between entry and clearance of Picornaviridae. Nature. 2017 Jan 19;541(7637):412-416.
Koppens MA, Bounova G, Gargiulo G, Tanger E, Janssen H, Cornelissen-Steijger P, Blom M, Song JY, Wessels LF, van Lohuizen M. Deletion of Polycomb Repressive Complex 2 From Mouse Intestine Causes Loss of Stem Cells. Gastroenterology. 2016 Jun 21. pii: S0016-5085(16)34677-7.
Wijdeven RH, Janssen H, Nahidiazar L, Janssen L, Jalink K, Berlin I, Neefjes J. Cholesterol and ORP1L-mediated ER contact sites control autophagosome transport and fusion with the endocytic pathway. Nat Commun. 2016 Jun 10;7.
Jongsma ML, Berlin I, Wijdeven RH, Janssen L, Janssen GM, Garstka MA, Janssen H, Mensink M, van Veelen PA, Spaapen RM, Neefjes J. An ER-Associated Pathway Defines Endosomal Architecture for Controlled Cargo Transport. Cell. 2016 Jun 30;166(1):152-166.
Gazendam RP, van de Geer A, van Hamme JL, Tool AT, van Rees DJ, Aarts CE, van den Biggelaar M, van Alphen F, Verkuijlen P, Meijer AB, Janssen H, Roos D, van den Berg TK, Kuijpers TW. Impaired killing of Candida albicans by granulocytes mobilized for transfusion purposes: a role for granule components. Haematologica. 2016 Jan 22. pii: haematol.2015.136630. [
Blomen VA, Májek P, Jae LT, Bigenzahn JW, Nieuwenhuis J, Staring J, Sacco R, van Diemen FR, Olk N, Stukalov A, Marceau C, Janssen H, Carette JE, Bennett KL, Colinge J, Superti-Furga G, Brummelkamp TR.. Gene essentiality and synthetic lethality in haploid human cells. Science. 2015 Nov 27;350(6264):1092-6.
Bernies van der Hiel, Marcel P. M. Stokkel, Wieneke A. Buikhuisen, Hans Janssen, Marie-Louise F. van Velthuysen, Robert J. Rhodius, Wouter V. Vogel. 18F-Choline PET/CT as a New Tool for Functional Imaging of Non-Proliferating Secreting Neuroendocrine Tumors. Journal of Endocrinology and Metabolism, Vol. 5, No. 4, Aug 2015, pages 267-271.
Szilagyi K, Gazendam RP, van Hamme JL, Tool AT, van Houdt M, Vos WA, Verkuijlen P, Janssen H, Belot A, Juillard L, Förster-Waldl E, Boztug K, Kraal G, de Winther MP, Kuijpers TW, van den Berg TK. Impaired microbial killing by neutrophils from patients with protein kinase C delta deficiency. J Allergy Clin Immunol. 2015 Nov;136
NIN
Lauw J Klaassen, Wim de Graaff, Jorrit B Van Asselt, J. Klooster, M. Kamermans Specific connectivity between photoreceptors and horizontal cells in the zebrafish retina Journal of Neurophysiology (2016)
Stephanie Dooves, Marianna Bugiani, Nienke L Postma, Emiel Polder, Niels Land, Stephen T Horan, Anne-Lieke F van Deijk, Aleid van de Kreeke, Gerbren Jacobs, Caroline Vuong, J. Klooster, M. Kamermans, Joke Wortel, Maarten Loos, Lisanne E Wisse, Gert C Scheper, Truus E M Abbink, Vivi M Heine, Marjo S van der Knaap. Astrocytes are central in the pathomechanisms of vanishing white matter. Journal of Clinical Investigation (2016)
Klooster, M. Kamermans An Ultrastructural and Immunohistochemical Analysis of the Outer Plexiform Layer of the Retina of the European Silver Eel (Anguilla anguilla L) PLoS One (2016)
Arne Battefeld, Jan Klooster, Maarten H P Kole. Myelinating satellite oligodendrocytes are integrated in a glial syncytium constraining neuronal high-frequency activity Nature Communications (2016)