Publications EMCA

EMCA publications 2017

AMC

Deletion of Adseverin in Osteoclasts Affects Cell Structure But Not Bone Metabolism. Cao Y, Wang Y, Sprangers S, Picavet DI, Glogauer M, McCulloch CA, Everts V. Calcif Tissue Int. 2017 Aug;101(2):207-216.

Thrombospondin-4 knockout in hypertension protects small-artery endothelial function but induces aortic aneurysms. Palao T, Rippe C, van Veen H, VanBavel E, Swärd K, Bakker EN. Am J Physiol Heart Circ Physiol. 2016 Jun 1;310(11):H1486-93.

Lipoprotein Lipase Maintains Microglial Innate Immunity in Obesity. Gao Y, Vidal-Itriago A, Kalsbeek MJ, Layritz C, García-Cáceres C, Tom RZ, Eichmann TO, Vaz FM, Houtkooper RH, van der Wel N, Verhoeven AJ, Yan J, Kalsbeek A, Eckel RH, Hofmann SM, Yi CX. Cell Rep. 2017 Sep 26;20(13):3034-3042.

Characterization and Temperature Dependence of Arctic Micromonas polaris Viruses. Maat DS, Biggs T, Evans C, van Bleijswijk JDL, van der Wel NN, Dutilh BE, Brussaard CPD. Viruses. 2017 Jun 2;9(6).

Subcellular localization of M. tuberculosis in vivo and effect of the adaptive immunity. van Zon M, de Punder K, van der Sar A, Brosch R, Pando RH, Grootemaat A, Tigchelaar-Gutter W, van der Wel N. Ultrastruct Pathol. 2017

Hyaluronan Nanoparticles Selectively Target Plaque-Associated Macrophages and Improve Plaque Stability in Atherosclerosis. Beldman TJ, Senders ML, Alaarg A, Pérez-Medina C, Tang J, Zhao Y, Fay F, Deichmöller J, Born B, Desclos E, van der Wel NN, Hoebe RA, Kohen F, Kartvelishvily E, Neeman M, Reiner T, Calcagno C, Fayad ZA, de Winther MPJ, Lutgens E, Mulder WJM, Kluza E. ACS Nano. 2017 Jun 27;11(6):5785-5799.

Receptor usage dictates HIV-1 restriction by human TRIM5α in dendritic cell subsets. Ribeiro CM, Sarrami-Forooshani R, Setiawan LC, Zijlstra-Willems EM, van Hamme JL, Tigchelaar W, van der Wel NN, Kootstra NA, Gringhuis SI, Geijtenbeek TB. Nature. 2016 Dec 15;540(7633):448-452.

The Influence of Sporulation Conditions on the Spore Coat Protein Composition of Bacillus subtilis Spores. Abhyankar WR, Kamphorst K, Swarge BN, van Veen H, van der Wel NN, Brul S, de Koster CG, de Koning LJ. Front Microbiol. 2016 Oct 13;7:1636.

Paravascular channels, cisterns, and the subarachnoid space in the rat brain: A single compartment with preferential pathways. Bedussi B, van der Wel NN, de Vos J, van Veen H, Siebes M, VanBavel E, Bakker EN. J Cereb Blood Flow Metab. 2017 Apr;37(4):1374-1385.

 

Pathologie

NLRX1 dampens oxidative stress and apoptosis in tissue injury via control of mitochondrial activity. Stokman G, Kors L, Bakker PJ, Rampanelli E, Claessen N, Teske GJD, Butter L, van Andel H, van den Bergh Weerman MA, Larsen PWB, Dessing MC, Zuurbier CJ, Girardin SE, Florquin S, Leemans JC. J Exp Med. 2017 Aug 7;214(8):2405-2420.

Metabolic injury-induced NLRP3 inflammasome activation dampens phospholipid degradation. Rampanelli E, Orsó E, Ochodnicky P, Liebisch G, Bakker PJ, Claessen N, Butter LM, van den Bergh Weerman MA, Florquin S, Schmitz G, Leemans JC.Sci Rep. 2017 Jun 6;7(1):2861.

 

NKI

Knockout of the Arp2/3 complex in epidermis causes a psoriasis-like disease hallmarked by hyperactivation of transcription factor Nrf2. Rob van der Kammen, Ji-Ying Song, Iris de Rink, Hans Janssen, Stefania Madonna, Claudia Scarponi, Cristina Albanesi, Wim Brugman, Metello Innocenti. Development. 2017 Nov 7.

Flat clathrin lattices are dynamic actin-controlled hubs for clathrin-mediated endocytosis and signalling of specific receptors. Leyton-Puig D, Isogai T, Argenzio E, van den Broek B, Klarenbeek J, Janssen H, Jalink K, Innocenti M. Nat Commun. 2017 Jul 13;8:16068.

Improving the solubility of nilotinib through novel spray-dried solid dispersions. Maikel Herbrink, Jan H.M. Schellens, Jos H. Beijnen, Bastiaan Nuijen. Int J Pharm. 2017 Jul 8;529(1-2):294-302.

Hermansky-Pudlak syndrome type 2: Aberrant pre-mRNA splicing and mislocalization of granule proteins in neutrophils. de Boer M, van Leeuwen K, Geissler J, van Alphen F, de Vries E, van der Kuip M, Terheggen SWJ, Janssen H, van den Berg TK, Meijer AB, Roos D, Kuijpers TWHum Mutat. 2017 Jun 6.

PLA2G16 represents a switch between entry and clearance of Picornaviridae. Staring J, von Castelmur E, Blomen VA, van den Hengel LG, Brockmann M, Baggen J, Thibaut HJ, Nieuwenhuis J, Janssen H, van Kuppeveld FJ, Perrakis A, Carette JE, Brummelkamp TR. Nature. 2017 Jan 19;541(7637):412-416.

 

EMCA publications 2015-2016

 

AMC

Receptor usage dictates HIV-1 restriction by human TRIM5α in dendritic cell subsets. Ribeiro CM, Sarrami-Forooshani R, Setiawan LC, Zijlstra-Willems EM, van Hamme JL, Tigchelaar W, van der Wel NN, Kootstra NA, Gringhuis SI, Geijtenbeek TB. Nature. 2016 Dec 15;540(7633):448-452.

The influence of sporulation conditions on the spore coat protein composition of Bacillus subtilis spores. Wishwas R. Abhyankar, Kiki Kamphorst, Bhagyashree N. Swarge, Henk van Veen, Nicole N. van der Wel, Stanley Brul, Chris G. de Koster, Leo J. de Koning. Frontiers in Microbiology 2016

The Thyroid Hormone Inactivating Enzyme Type 3 Deiodinase is Present in Bactericidal Granules and the Cytoplasm of Human Neutrophils.  van der Spek AH, Bloise FF, Tigchelaar W, Dentice M, Salvatore D, van der Wel NN, Fliers E, Boelen A. Endocrinology. 2016 Aug;157(8):3293-305

Paravascular channels, cisterns, and the subarachnoid space in the rat brain: A single compartment with preferential pathways. Bedussi B, van der Wel NN, de Vos J, van Veen H, Siebes M, VanBavel E, Bakker EN. J Cereb Blood Flow Metab. 2016 Jun 15.

The ESX-5 System of Pathogenic Mycobacteria Is Involved In Capsule Integrity and Virulence through Its Substrate PPE10. Ates LS, van der Woude AD, Bestebroer J, van Stempvoort G, Musters RJ, Garcia-Vallejo JJ, Picavet DI, Weerd Rv, Maletta M, Kuijl CP, van der Wel NN, Bitter W. PLoS Pathog. 2016 Jun 9;12(6).

Bacillus subtilis Spore Inner Membrane Proteome. Zheng L, Abhyankar W, Ouwerling N, Dekker HL, van Veen H, van der Wel NN, Roseboom W, de Koning LJ, Brul S, de Koster CG. J Proteome Res. 2016 Feb 5;15(2):585-94.

Betulinic acid induces a novel cell death pathway that depends on cardiolipin modification. Potze L, Di Franco S, Grandela C, Pras-Raves ML, Picavet DI, van Veen HA, van Lenthe H, Mullauer FB, van der Wel NN, Luyf A, van Kampen AH, Kemp S, Everts V, Kessler JH, Vaz FM, Medema JP. Oncogene. 2016 Jan 28;35(4):427-37.

Increased epidermal thickness and abnormal epidermal differentiation in keloid scars. Limandjaja GC, van den Broek LJ, Waaijman T, van Veen HA, Everts V, Monstrey S, Scheper RJ, Niessen FB, Gibbs S. Br J Dermatol. 2016 Jul 5.

Ultrastructural aspects of foreign body giant cells generated on different substrates. Ten Harkel B, Koopsen J, van Putten SM, van Veen H, Picavet DI, de Vries TJ, Bank RA, Everts V. J Struct Biol. 2016 Jul;195(1):31-40.

New insights into the effects of Chronic kidney failure and dialysate exposure on the peritoneum. Vlahu CA, Aten J, de Graaff M, van Veen H, Everts V, de Waart DR, Struijk DG, Krediet RT. Perit Dial Int. 2016

Thrombospondin-4 knockout in hypertension protects small-artery endothelial function but induces aortic aneurysms. Palao T, Rippe C, van Veen H, VanBavel E, Swärd K, Bakker EN. Am J Physiol Heart Circ Physiol. 2016 Jun 1;310(11).

Plasmalemma Vesicle-Associated Protein Has a Key Role in Blood-Retinal Barrier Loss. Wisniewska-Kruk J, van der Wijk AE, van Veen HA, Gorgels TG, Vogels IM, Versteeg D, Van Noorden CJ, Schlingemann RO, Klaassen I.  Am J Pathol. 2016 Apr;186(4):1044-54

Ultrastructural effects and antibiofilm activity of LFchimera against Burkholderia pseudomallei. Puknun A, Kanthawong S, Anutrakunchai C, Nazmi K, Tigchelaar W, Hoeben KA, Veerman EC, Bolscher JG, Taweechaisupapong S. World. J Microbiol Biotechnol. 2016 Feb;32(2):33. doi: 10.1007/s11274-015-1988-x. Epub 2016 Jan 11.

The foreign body giant cell cannot resorb bone, but dissolves hydroxyapatite like osteoclasts. ten Harkel B, Schoenmaker T, Picavet DI, Davison NL, de Vries TJ, Everts V. PLoS One. 2015 Oct 1;10(10):e0139564. doi: 10.1371/journal.pone.0139564. eCollection 2015.

 

Pathologie

Mucosal integrity and sensitivity to acid in the proximal esophagus in patients with gastroesophageal reflux disease. van Hoeij FB, Weijenborg PW, van den Bergh Weerman MA, van den Wijngaard RM, Verheij J, Smout AJ, Bredenoord AJ. Am J Physiol Gastrointest Liver Physiol. 2016 Jul 1;311(1)

Noncirrhotic Portal Hypertension in Perinatally HIV-infected Adolescents Treated With Didanosine-containing Antiretroviral Regimens in Childhood. Scherpbier HJ, Terpstra V, Pajkrt D, Puthakanit T, Ananworanich J, Foster C, van den Bergh Weerman M, Deurloo EE, van der Valk M, Kuijpers TW, Koot BG.Pediatr Infect Dis J. 2016 Aug;35(8):e248-52.

Unique Renal Manifestation of Type I Cryoglobulinemia, With Massive Crystalloid Deposits in Glomerular Histiocytes, Podocytes, and Endothelial Cells. Hoelbeek J, Duivenvoorden R, de Boer OJ, Claessen N, Van den Bergh Weerman MA, Roelofs JJ, Kers J, Ten Berge IJ, Florquin S. Am J Clin Pathol. 2016 Feb;145(2):282-5.

Histological Response to Fluticasone Propionate in Patients With Eosinophilic Esophagitis Is Associated With Improved Functional Esophageal Mucosal Integrity. van Rhijn BD, Verheij J, van den Bergh Weerman MA, Verseijden C, van den Wijngaard RM, de Jonge WJ, Smout AJ, Bredenoord AJ. Am J Gastroenterol. 2015 Sep;110(9):1289-97.

 

ACTA

 

Sprangers S, Behrendt N, Engelholm L, Cao Y, Everts V. Phagocytosis of

Collagen Fibrils by Fibroblasts In Vivo Is Independent of the uPARAP/Endo180

Receptor. J Cell Biochem. 2016

 

Limandjaja GC, van den Broek LJ, Waaijman T, van Veen HA, Everts V, Monstrey

S, Scheper RJ, Niessen FB, Gibbs S. Increased epidermal thickness and abnormal

epidermal differentiation in keloid scars. Br J Dermatol. 2017

Jan;176(1):116-126.

 

Ten Harkel B, Koopsen J, van Putten SM, van Veen H, Picavet DI, de Vries TJ,

Bank RA, Everts V. Ultrastructural aspects of foreign body giant cells generated

on different substrates. J Struct Biol. 2016.

 

ten Harkel B, Schoenmaker T, Picavet DI, Davison NL, de Vries TJ, Everts V.

The Foreign Body Giant Cell Cannot Resorb Bone, But Dissolves Hydroxyapatite Like

Osteoclasts. PLoS One. 2015 Oct 1;10

 

Potze L, Di Franco S, Grandela C, Pras-Raves ML, Picavet DI, van Veen HA, van

Lenthe H, Mullauer FB, van der Wel NN, Luyf A, van Kampen AH, Kemp S, Everts V,

Kessler JH, Vaz FM, Medema JP. Betulinic acid induces a novel cell death pathway

that depends on cardiolipin modification. Oncogene. 2016 Jan 28;35(4):427-37.

 

 

NKI

 

Staring J, von Castelmur E, Blomen VA, van den Hengel LG, Brockmann M, Baggen J, Thibaut HJ, Nieuwenhuis J, Janssen H, van Kuppeveld FJ, Perrakis A, Carette JE, Brummelkamp TR. PLA2G16 represents a switch between entry and clearance of Picornaviridae. Nature. 2017 Jan 19;541(7637):412-416.

 

Koppens MA, Bounova G, Gargiulo G, Tanger E, Janssen H, Cornelissen-Steijger P, Blom M, Song JY, Wessels LF, van Lohuizen M. Deletion of Polycomb Repressive Complex 2 From Mouse Intestine Causes Loss of Stem Cells. Gastroenterology. 2016 Jun 21. pii: S0016-5085(16)34677-7.

 

Wijdeven RH, Janssen H, Nahidiazar L, Janssen L, Jalink K, Berlin I, Neefjes J. Cholesterol and ORP1L-mediated ER contact sites control autophagosome transport and fusion with the endocytic pathway. Nat Commun. 2016 Jun 10;7.

 

Jongsma ML, Berlin I, Wijdeven RH, Janssen L, Janssen GM, Garstka MA, Janssen H, Mensink M, van Veelen PA, Spaapen RM, Neefjes J. An ER-Associated Pathway Defines Endosomal Architecture for Controlled Cargo Transport. Cell. 2016 Jun 30;166(1):152-166.

 

Gazendam RP, van de Geer A, van Hamme JL, Tool AT, van Rees DJ, Aarts CE, van den Biggelaar M, van Alphen F, Verkuijlen P, Meijer AB, Janssen H, Roos D, van den Berg TK, Kuijpers TW. Impaired killing of Candida albicans by granulocytes mobilized for transfusion purposes: a role for granule components. Haematologica. 2016 Jan 22. pii: haematol.2015.136630. [

 

Blomen VA, Májek P, Jae LT, Bigenzahn JW, Nieuwenhuis J, Staring J, Sacco R, van Diemen FR, Olk N, Stukalov A, Marceau C, Janssen H, Carette JE, Bennett KL, Colinge J, Superti-Furga G, Brummelkamp TR.. Gene essentiality and synthetic lethality in haploid human cells. Science. 2015 Nov 27;350(6264):1092-6.

 

Bernies van der Hiel, Marcel P. M. Stokkel, Wieneke A. Buikhuisen, Hans Janssen, Marie-Louise F. van Velthuysen, Robert J. Rhodius, Wouter V. Vogel. 18F-Choline PET/CT as a New Tool for Functional Imaging of Non-Proliferating Secreting Neuroendocrine Tumors. Journal of Endocrinology and Metabolism, Vol. 5, No. 4, Aug 2015, pages 267-271.

 

Szilagyi K, Gazendam RP, van Hamme JL, Tool AT, van Houdt M, Vos WA, Verkuijlen P, Janssen H, Belot A, Juillard L, Förster-Waldl E, Boztug K, Kraal G, de Winther MP, Kuijpers TW, van den Berg TK. Impaired microbial killing by neutrophils from patients with protein kinase C delta deficiency. J Allergy Clin Immunol. 2015 Nov;136

 

 

NIN

 

Lauw J Klaassen, Wim de Graaff, Jorrit B Van Asselt, J. Klooster, M. Kamermans Specific connectivity between photoreceptors and horizontal cells in the zebrafish retina Journal of Neurophysiology (2016)

 

Stephanie Dooves, Marianna Bugiani, Nienke L Postma, Emiel Polder, Niels Land, Stephen T Horan, Anne-Lieke F van Deijk, Aleid van de Kreeke, Gerbren Jacobs, Caroline Vuong, J. Klooster, M. Kamermans, Joke Wortel, Maarten Loos, Lisanne E Wisse, Gert C Scheper, Truus E M Abbink, Vivi M Heine, Marjo S van der Knaap. Astrocytes are central in the pathomechanisms of vanishing white matter. Journal of Clinical Investigation (2016)

 

Klooster, M. Kamermans An Ultrastructural and Immunohistochemical Analysis of the Outer Plexiform Layer of the Retina of the European Silver Eel (Anguilla anguilla L) PLoS One (2016)

 

Arne Battefeld, Jan Klooster, Maarten H P Kole. Myelinating satellite oligodendrocytes are integrated in a glial syncytium constraining neuronal high-frequency activity Nature Communications (2016)

 

 

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